Stem-loop tni-mir-181a-2

Accession

MI0003386

Description

Tetraodon nigroviridis tni-mir-181a-2 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

caguuuuuucaggucuuuggggAACAUUCAACGCUGUCGGUGAGUuuggugacucagaaaaaaaccaucgagcguugaguguaccuuuagg
..............(((.((((.(((((((((((..((((((.((((..(........)..))))))))))))))))))))).)))).)))

Structure

caguuuuuucaggu   u    A           UG      A    gg gac 
              cuu gggg ACAUUCAACGC  UCGGUG GUuu  u   u
              ||| |||| |||||||||||  |||||| ||||  |    
              gga uucc ugugaguugcg  agcuac caaa  a   c
--------------   u    a           --      -    aa aga 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified mammalian sequence (Mihaela Zavolan, personal communication).

Genome context

Un_random: 58989020-58989110 [-]

Mature tni-miR-181a-5p

• Accession: MIMAT0003050
• Description: Tetraodon nigroviridis tni-miR-181a-5p mature miRNA
• Sequence: 23 - AACAUUCAACGCUGUCGGUGAGU - 45
• Evidence: not_experimental

References