Stem-loop fru-mir-29a-1

Accession

MI0003392

Description

Fugu rubripes fru-mir-29a-1 precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

agguugacugauuucuuuugguguucagaguccaauucuguuucUAGCACCAUUUGAAAUCGGUUAcagug
....(((((((((((...(((((((((((((...)))))).....)))))))...))))))))))).....

Structure

-aggu           uuu       -----      c 
     ugacugauuuc   ugguguu     cagagu  
     |||||||||||   |||||||     |||||| c
     AUUGGCUAAAG   ACCACGA     gucuua  
gugac           UUU       Ucuuu      a 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE591777.1: 252677-252747 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-29a-1

Mature fru-miR-29a

• Accession: MIMAT0003053
• Description: Fugu rubripes fru-miR-29a mature miRNA
• Sequence: 45 - UAGCACCAUUUGAAAUCGGUUA - 66
• Evidence: not_experimental

References