miRBase entry: tni-mir-132

Stem-loop tni-mir-132


Accession
MI0003400
Description
Tetraodon nigroviridis tni-mir-132 precursor miRNA
Gene family
MIPF0000065; mir-132

Literature search
1 open access papers mention tni-mir-132
(5 sentences)

Sequence

gucuccaugguuaccguggcauuagauuguuacuguagcaacugcaccagcggUAACAGUCUACAGCCAUGGUCGcuagggggca
((((((.((((.((((((((..((((((((((((((.((....))....))))))))))))))..)))))))).)))))))))).

Structure
-      a    u        au              ---a  a 
 gucucc uggu accguggc  uagauuguuacugu    gc a
 |||||| |||| ||||||||  ||||||||||||||    ||  
 cggggg aucG UGGUACCG  AUCUGACAAUggcg    cg c
a      -    C        AC              acca  u 


Annotation confidence Not enough data
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Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
Un_random: 63608560-63608644 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-132
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-132

Accession MIMAT0003060
Description Tetraodon nigroviridis tni-miR-132 mature miRNA
Sequence 54 - UAACAGUCUACAGCCAUGGUCG - 75
Evidence not_experimental

References