miRBase entry: fru-mir-125b

Stem-loop fru-mir-125b


Accession
MI0003401
Description
Fugu rubripes fru-mir-125b precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

cucucauUCCCUGAGACCCUAACUUGUGAcguugugcugugaugugcacggguuggguucuugggagcug
......(((((.((((.((((((((((((((((.......))))).))))))))))).)))))))))...

Structure
cucuca     U    C           -     gu 
      uUCCC GAGA CCUAACUUGUG Acguu  g
      ||||| |||| ||||||||||| |||||  c
      gaggg uucu ggguugggcac uguag  u
---guc     -    u           g     ug 


Annotation confidence Not enough data
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Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602549.1: 9617257-9617326 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from fru-mir-125b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fru-miR-125b

Accession MIMAT0003061
Description Fugu rubripes fru-miR-125b mature miRNA
Sequence 8 - UCCCUGAGACCCUAACUUGUGA - 29
Evidence not_experimental

References