Stem-loop tni-mir-125b

Accession

MI0003402

Description

Tetraodon nigroviridis tni-mir-125b precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

guaccucucucauUCCCUGAGACCCUAACUUGUGAcguugugcugugaugugcacggguuggguucuugggagcugcgaggggcgcucacacauc
((.((((((.(((((((.((((.((((((((((((((((.......))))).))))))))))).))))))))).)).)))))).)).........

Structure

---------  a      u  -     U    C           -     gu 
         gu ccucuc ca uUCCC GAGA CCUAACUUGUG Acguu  g
         || |||||| || ||||| |||| ||||||||||| |||||  c
         cg ggggag gu gaggg uucu ggguugggcac uguag  u
cuacacacu  c      c  c     -    u           g     ug 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

7: 5613623-5613717 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-125b

Mature tni-miR-125b

• Accession: MIMAT0003062
• Description: Tetraodon nigroviridis tni-miR-125b mature miRNA
• Sequence: 14 - UCCCUGAGACCCUAACUUGUGA - 35
• Evidence: not_experimental

References