Stem-loop fru-mir-29b-1

Accession

MI0003405

Description

Fugu rubripes fru-mir-29b-1 precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

uccagaagcugguuucauguggugguuuagaugugucuucccucuugucUAGCACCAUUUGAAAUCAGUGUucuugg
.((((((((((((((((.((((((..((((((..(........)..)))))))))))).)))))))))).))).)))

Structure

u   -   -          u      gu      gu ucu 
 cca gaa gcugguuuca guggug  uuagau  g   u
 ||| ||| |||||||||| ||||||  ||||||  |    
 ggu cuU UGACUAAAGU UACCAC  GAUcug  c   c
-   u   G          U      --      uu ucc 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE591818.1: 89646-89722 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-29b-1

Mature fru-miR-29b

• Accession: MIMAT0003055
• Description: Fugu rubripes fru-miR-29b mature miRNA
• Sequence: 50 - UAGCACCAUUUGAAAUCAGUGU - 71
• Evidence: not_experimental

References