Stem-loop fru-let-7a-1

Accession

MI0003407

Description

Fugu rubripes fru-let-7a-1 precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

cagguUGAGGUAGUAGGUUGUAUAGUUgagagugacaccacaggagaugacuguacagccuccuagcuuucccu
.(((..(((.(((.(((((((((((((....(((....))).......))))))))))))).))).)))..)))

Structure

c   uU   G   U             ---gaga   a 
 agg  GAG UAG AGGUUGUAUAGUU       gug c
 |||  ||| ||| |||||||||||||       |||  
 ucc  uuc auc uccgacaugucag       cac a
-   cu   g   c             uagagga   c 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602549.1: 9611356-9611429 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-let-7a-1

Mature fru-let-7a

• Accession: MIMAT0002928
• Description: Fugu rubripes fru-let-7a mature miRNA
• Sequence: 6 - UGAGGUAGUAGGUUGUAUAGUU - 27
• Evidence: not_experimental

References