miRBase entry: tni-let-7a-1

Stem-loop tni-let-7a-1


Accession
MI0003408
Description
Tetraodon nigroviridis tni-let-7a-1 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

cagggUGAGGUAGUAGGUUGUAUAGUUgagagugacaccacaggagauaacuguacagccuccuagcuuucccu
.((((.(((.(((.((((((((((((((...(((....)))......)))))))))))))).))).))).))))

Structure
c    U   G   U              ---aga   a 
 aggg GAG UAG AGGUUGUAUAGUUg      gug c
 |||| ||| ||| ||||||||||||||      |||  
 uccc uuc auc uccgacaugucaau      cac a
-    u   g   c              agagga   c 


Annotation confidence Not enough data
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Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
7: 5619181-5619254 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-let-7a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-let-7a

Accession MIMAT0002929
Description Tetraodon nigroviridis tni-let-7a mature miRNA
Sequence 6 - UGAGGUAGUAGGUUGUAUAGUU - 27
Evidence not_experimental

References