Stem-loop tni-mir-100

Accession

MI0003410

Description

Tetraodon nigroviridis tni-mir-100 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

cacaAACCCGUAGAUCCGAACUUGUGgugacuggccgcacaagcucguaucuauagguaugug
((((.(((.((((((.(((.((((((.((......)))))))).))).)))))).))).))))

Structure

    A   C      C   A      g  ac 
caca ACC GUAGAU CGA CUUGUG ug  u
|||| ||| |||||| ||| |||||| ||   
gugu ugg uaucua gcu gaacac gc  g
    a   a      u   c      -  cg 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

7: 5619635-5619697 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-100

Mature tni-miR-100

• Accession: MIMAT0003064
• Description: Tetraodon nigroviridis tni-miR-100 mature miRNA
• Sequence: 5 - AACCCGUAGAUCCGAACUUGUG - 26
• Evidence: not_experimental

References