Stem-loop fru-mir-23a-1

Accession

MI0003415

Description

Fugu rubripes fru-mir-23a-1 precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

gcuguggcggggaggguuccuggcaccgugauuugaugcacaaagacaaacaaaaAUCACAUUGCCAGGGAUUUCCAcccuuucacag
.((((((.((((.((((((((((((..(((((((...................)))))))..))))))))))..)).)))).))))))

Structure

g      c    a  --          cc       gaugcaca 
 cugugg gggg gg  guuccuggca  gugauuu        a
 |||||| |||| ||  ||||||||||  |||||||        a
 gacacu uccc CC  UAGGGACCGU  CACUAaa        g
-      u    A  UU          UA       aacaaaca 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602554.1: 7363613-7363700 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-23a-1

Mature fru-miR-23a

• Accession: MIMAT0002912
• Description: Fugu rubripes fru-miR-23a mature miRNA
• Sequence: 56 - AUCACAUUGCCAGGGAUUUCCA - 77
• Evidence: not_experimental

References