Stem-loop fru-mir-27e

Accession

MI0003417

Description

Fugu rubripes fru-mir-27e precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

cacuugcuaaaggcaccgagcuuagcuaauuggugagcauugaucccugcuauguguugUUCACAGUGGCUAAGUUCAGUGccugaggugaaauaguuga
...(((((..((((((.(((((((((((....(((((((..................)))))))..))))))))))).))))))..))))).........

Structure

------cac     aa      c           auug       uugauccc 
         uugcu  aggcac gagcuuagcua    gugagca        u
         |||||  |||||| |||||||||||    |||||||         
         agugg  uccGUG CUUGAAUCGGU    CACUUgu        g
aguugauaa     ag      A           --GA       uguguauc 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602554.1: 7364007-7364106 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-27e

Mature fru-miR-27e

• Accession: MIMAT0003067
• Description: Fugu rubripes fru-miR-27e mature miRNA
• Sequence: 60 - UUCACAGUGGCUAAGUUCAGUG - 81
• Evidence: not_experimental

References