Stem-loop tni-mir-27e

Accession

MI0003418

Description

Tetraodon nigroviridis tni-mir-27e precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

cucuugcugaaggcacagagcuuagcuaauuggugagcauugaucccugcuauguguugUUCACAGUGGCUAAGUUCAGUGcc
...........(((((.(((((((((((....(((((((..................)))))))..))))))))))).)))))

Structure

cucuugcugaa     a           auug       uugauccc 
           ggcac gagcuuagcua    gugagca        u
           ||||| |||||||||||    |||||||         
           ccGUG CUUGAAUCGGU    CACUUgu        g
-----------     A           --GA       uguguauc 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

1: 16059174-16059256 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-27e

Mature tni-miR-27e

• Accession: MIMAT0003068
• Description: Tetraodon nigroviridis tni-miR-27e mature miRNA
• Sequence: 60 - UUCACAGUGGCUAAGUUCAGUG - 81
• Evidence: not_experimental

References