Stem-loop fru-mir-1

Accession

MI0003423

Description

Fugu rubripes fru-mir-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

cuuaguguacauacuucuuuauguacccauauggacauaugauaacuaUGGAAUGUAAAGAAGUAUGUAUucuugg
((.((.((((((((((((((((((..(((((.(............)))))).)))))))))))))))))).)).))

Structure

  u  u                  ac     u gacau 
cu ag guacauacuucuuuaugu  ccaua g     a
|| || ||||||||||||||||||  ||||| |      
gg uc UAUGUAUGAAGAAAUGUA  GGUau c     u
  u  u                  -A     - aauag 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602556.1: 1379732-1379807 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-1

Mature fru-miR-1

• Accession: MIMAT0003071
• Description: Fugu rubripes fru-miR-1 mature miRNA
• Sequence: 49 - UGGAAUGUAAAGAAGUAUGUAU - 70
• Evidence: not_experimental

References