Stem-loop fru-mir-23a-3

Accession

MI0003429

Description

Fugu rubripes fru-mir-23a-3 precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

ucuguuggccagggggauuccuggcagagugauuuuuagacuacaggacugaAUCACAUUGCCAGGGAUUUCCAauggcu
......(((((.(((((((((((((((.(((((((...............))))))).)))))))))))))))..)))))

Structure

ucuguu     -g               a       uuagac 
      ggcca  ggggauuccuggcag gugauuu      u
      |||||  ||||||||||||||| |||||||      a
      ucggu  CCUUUAGGGACCGUU CACUAag      c
------     aA               A       ucagga 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602539.1: 5648552-5648631 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-23a-3

Mature fru-miR-23a

• Accession: MIMAT0002912
• Description: Fugu rubripes fru-miR-23a mature miRNA
• Sequence: 53 - AUCACAUUGCCAGGGAUUUCCA - 74
• Evidence: not_experimental

References