Stem-loop tni-mir-24-2

Accession

MI0003434

Description

Tetraodon nigroviridis tni-mir-24-2 precursor miRNA

Gene family

MIPF0000041; mir-24

Sequence

gggucagucuccugugccugcugugcugauaaucagugugugacguuggcUGGCUCAGUUCAGCAGGAACAGgggacugg
....(((((((((((.(((((((.(((((...(((((...........))))).))))).))))))).))))))))))).

Structure

gggu           g       u     uaa     gugu 
    cagucuccugu ccugcug gcuga   ucagu    g
    ||||||||||| ||||||| |||||   |||||    a
    gucagggGACA GGACGAC UGACU   GGUcg    c
---g           A       U     --C     guug 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

3: 8971059-8971138 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-24-2

Mature tni-miR-24

• Accession: MIMAT0003066
• Description: Tetraodon nigroviridis tni-miR-24 mature miRNA
• Sequence: 51 - UGGCUCAGUUCAGCAGGAACAG - 72
• Evidence: not_experimental

References