miRBase entry: fru-mir-138

Stem-loop fru-mir-138


Accession
MI0003435
Description
Fugu rubripes fru-mir-138 precursor miRNA
Gene family
MIPF0000075; mir-138


Sequence

gcugcAGCUGGUGUUGUGAAUCAGGCCgaugacagacaccuccuauaagccggcuauuucacaacaccaggguggcacc
(((((..(((((((((((((...(((((......................)))))..))))))))))))).)))))...

Structure
---     AG             UCA     augacagaca 
   gcugc  CUGGUGUUGUGAA   GGCCg          c
   |||||  |||||||||||||   |||||           
   cggug  gaccacaacacuu   ucggc          c
cca     -g             -ua     cgaauauccu 


Annotation confidence Not enough data
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Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
HE602543.1: 338564-338642 [+]

Database links

Mature fru-miR-138

Accession MIMAT0003079
Description Fugu rubripes fru-miR-138 mature miRNA
Sequence 6 - AGCUGGUGUUGUGAAUCAGGCC - 27
Evidence not_experimental

References