Stem-loop tni-mir-138

Accession

MI0003436

Description

Tetraodon nigroviridis tni-mir-138 precursor miRNA

Gene family

MIPF0000075; mir-138

Sequence

gcugcAGCUGGUGUUGUGAAUCAGGCCgaugacagacaccuccuagaagccggcuauuucacaacaccaggguggcacc
(((((..(((((((((((((...(((((......................)))))..))))))))))))).)))))...

Structure

---     AG             UCA     augacagaca 
   gcugc  CUGGUGUUGUGAA   GGCCg          c
   |||||  |||||||||||||   |||||           
   cggug  gaccacaacacuu   ucggc          c
cca     -g             -ua     cgaagauccu 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

13: 1437200-1437278 [+]

Mature tni-miR-138

• Accession: MIMAT0003080
• Description: Tetraodon nigroviridis tni-miR-138 mature miRNA
• Sequence: 6 - AGCUGGUGUUGUGAAUCAGGCC - 27
• Evidence: not_experimental

References