Stem-loop fru-mir-17-2

Accession

MI0003441

Description

Fugu rubripes fru-mir-17-2 precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

gucaaaguaguguCAAAGUGCUUACAGUGCAGGUAguuugaugacaucuacugcagugaaggcacuuucagcgcuauucuga
.(((.((((((((.(((((((((.((.(((((.(((..((....)).)))))))).)).)))))))))..)))))))).)))

Structure

g   a        -C         A  G     G   uu  a 
 uca aguagugu  AAAGUGCUU CA UGCAG UAg  ug u
 ||| ||||||||  ||||||||| || ||||| |||  ||  
 agu uuaucgcg  uuucacgga gu acguc auc  ac g
-   c        ac         a  g     -   -u  a 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602535.1: 14441014-14441095 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-17-2

Mature fru-miR-17

• Accession: MIMAT0002916
• Description: Fugu rubripes fru-miR-17 mature miRNA
• Sequence: 14 - CAAAGUGCUUACAGUGCAGGUA - 35
• Evidence: not_experimental

References