Stem-loop tni-mir-92-1

Accession

MI0003446

Description

Tetraodon nigroviridis tni-mir-92-1 precursor miRNA

Gene family

MIPF0000013; mir-25

Sequence

cuuuccuguacagguugggagagguagcaaugcucggaguucauguggUAUUGCACUUGUCCCGGCCUGUggag
.....((.((((((((((((.((((.(((((((.((.(.....).))))))))))))).)))))))))))).))

Structure

cuuuc  g            g    a       u  g g 
     cu uacagguuggga aggu gcaaugc cg a u
     || |||||||||||| |||| ||||||| || | u
     ga gUGUCCGGCCCU UUCA CGUUAUg gu u c
-----  g            G    -       -  g a 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

2: 12892714-12892787 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-92-1

Mature tni-miR-92

• Accession: MIMAT0002925
• Description: Tetraodon nigroviridis tni-miR-92 mature miRNA
• Sequence: 49 - UAUUGCACUUGUCCCGGCCUGU - 70
• Evidence: not_experimental

References