Stem-loop tni-mir-183

Accession

MI0003454

Description

Tetraodon nigroviridis tni-mir-183 precursor miRNA

Gene family

MIPF0000066; mir-183

Sequence

cugugUAUGGCACUGGUAGAAUUCACUGugagagcucacuaucagugaauuaccauagggccauaaacag
((((.((((((..(((((..((((((((..((......))..)))))))))))))....)))))).))))

Structure

    g      --AC     GA        ug  ag 
cugu UAUGGC    UGGUA  AUUCACUG  ag  c
|||| ||||||    |||||  ||||||||  ||   
gaca auaccg    accau  uaagugac  uc  u
    a      ggau     --        ua  ac 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

19: 3385637-3385706 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-183

Mature tni-miR-183

• Accession: MIMAT0003090
• Description: Tetraodon nigroviridis tni-miR-183 mature miRNA
• Sequence: 6 - UAUGGCACUGGUAGAAUUCACUG - 28
• Evidence: not_experimental

References