Stem-loop fru-mir-96

Accession

MI0003455

Description

Fugu rubripes fru-mir-96 precursor miRNA

Gene family

MIPF0000072; mir-96

Sequence

cucuucuucgcccauUUUGGCACUAGCACAUUUUUGCUucuguauguauacuuugagcaauuauguguagugccaauauaggagaagacagacuuucaaccu
.((((((((.((.((.(((((((((.(((((..((((((..(((....)))...))))))..)))))))))))))).)).)).))))).)))..........

Structure

---------c   -     g  c  U         G     UU      -cu   u 
          ucu ucuuc cc au UUGGCACUA CACAU  UUGCUu   gua g
          ||| ||||| || || ||||||||| |||||  ||||||   |||  
          aga agaag gg ua aaccgugau gugua  aacgag   cau u
uccaacuuuc   c     a  a  u         -     uu      uuu   a 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602552.1: 5207770-5207871 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-96

Mature fru-miR-96

• Accession: MIMAT0003091
• Description: Fugu rubripes fru-miR-96 mature miRNA
• Sequence: 16 - UUUGGCACUAGCACAUUUUUGCU - 38
• Evidence: not_experimental

References