Stem-loop tni-mir-182

Accession

MI0003458

Description

Tetraodon nigroviridis tni-mir-182 precursor miRNA

Gene family

MIPF0000116; mir-182

Sequence

uguuuggcaaugguagaacucacacuggugagguagauggauccggUGGUUCUAGACUUGCCAACUA
...(((((((...((((((...((((((..............))))))))))))...)))))))...

Structure

ugu       ugg      uca      ugaggu 
   uuggcaa   uagaac   cacugg      a
   |||||||   ||||||   ||||||       
   AACCGUU   AUCUUG   GUggcc      g
AUC       CAG      ---      uaggua 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

19: 3385158-3385224 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-182

Mature tni-miR-182

• Accession: MIMAT0003094
• Description: Tetraodon nigroviridis tni-miR-182 mature miRNA
• Sequence: 47 - UGGUUCUAGACUUGCCAACUA - 67
• Evidence: not_experimental

References