Stem-loop tni-mir-15a

Accession

MI0003470

Description

Tetraodon nigroviridis tni-mir-15a precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

cuggugaugcugUAGCAGCACGGAAUGGUUUGUGaguuacacugagauacaagccaugcugugcugccgca
..........(((.(((((((((.((((((((((..(((...)))..)))))))))).))))))))).)))

Structure

cuggugaugc   A         A          ag   c 
          ugU GCAGCACGG AUGGUUUGUG  uua  
          ||| ||||||||| ||||||||||  ||| a
          acg cgucguguc uaccgaacau  agu  
----------   c         g          ag   c 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

2: 11019282-11019352 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-15a

Mature tni-miR-15a

• Accession: MIMAT0003106
• Description: Tetraodon nigroviridis tni-miR-15a mature miRNA
• Sequence: 13 - UAGCAGCACGGAAUGGUUUGUG - 34
• Evidence: not_experimental

References