Stem-loop tni-mir-16

Accession

MI0003472

Description

Tetraodon nigroviridis tni-mir-16 precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

UAGCAGCACGUAAAUAUUGGAGuuaaggcucucugugauaccuccaguauugaucgugcugcugaagcaaag
((((((((((..((((((((((.((..((.....))..)).))))))))))...))))))))))........

Structure

--------          -UA          u  ag  u 
        UAGCAGCACG   AAUAUUGGAG ua  gc c
        ||||||||||   |||||||||| ||  || u
        gucgucgugc   uuaugaccuc au  ug c
gaaacgaa          uag          c  ag  u 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

2: 11019481-11019552 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-mir-16

Mature tni-miR-16

• Accession: MIMAT0003108
• Description: Tetraodon nigroviridis tni-miR-16 mature miRNA
• Sequence: 1 - UAGCAGCACGUAAAUAUUGGAG - 22
• Evidence: not_experimental

References