Stem-loop fru-mir-181a-2

Accession

MI0003475

Description

Fugu rubripes fru-mir-181a-2 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

gacuuugucaagucuuuggggAACAUUCAACGCUGUCGGUGAGUuuugucuccgaaaaaccaucgacuguugaguguacccugacacuugagcuccc
.......((((((..((((((.((((((((((..(((((((.(((((........)))))))))))))))))))))).)))))).))))))......

Structure

gacuuug      cu      A          CU       A     guc 
       ucaagu  uugggg ACAUUCAACG  GUCGGUG GUuuu   u
       ||||||  |||||| ||||||||||  ||||||| |||||    
       aguuca  aguccc ugugaguugu  cagcuac caaaa   c
-cccucg      -c      a          --       -     agc 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified mammalian sequence (Mihaela Zavolan, personal communication).

Genome context

HE602539.1: 1138878-1138974 [+]

Mature fru-miR-181a-5p

• Accession: MIMAT0003111
• Description: Fugu rubripes fru-miR-181a-5p mature miRNA
• Sequence: 22 - AACAUUCAACGCUGUCGGUGAGU - 44
• Evidence: not_experimental

References