Stem-loop hsa-mir-544a

Accession

MI0003515

Symbol

HGNC: MIR544A

Description

Homo sapiens hsa-mir-544a precursor miRNA

Literature search

25 open access papers mention hsa-mir-544a
(147 sentences)

Sequence

119 reads, 2.0 reads per million, 42 experiments

auuuucaucaccuagggAUCUUGUUAAAAAGCAGAUUCUgauucagggaccaagAUUCUGCAUUUUUAGCAAGUUCucaagugaugcuaau
.....((((((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..)))))).....

Structure

auuuu      cua    U           -     U   gauuc 
     caucac   gggA CUUGUUAAAAA GCAGA UCU     a
     ||||||   |||| ||||||||||| ||||| |||     g
     guagug   cuCU GAACGAUUUUU CGUCU Aga     g
uaauc      -aa    U           A     U   accag 

Annotation confidence High

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context

chr14: 101048658-101048748 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from hsa-mir-544a

Disease association

hsa-mir-544a is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-544a-5p

• Accession: MIMAT0060797
• Description: Homo sapiens hsa-miR-544a-5p mature miRNA
• Sequence: 18 - AUCUUGUUAAAAAGCAGAUUCU - 39
• Evidence: experimental ; cloned [1-2]

Mature hsa-miR-544a-3p

• Accession: MIMAT0003164
• Description: Homo sapiens hsa-miR-544a-3p mature miRNA
• Sequence: 55 - AUUCUGCAUUUUUAGCAAGUUC - 76
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16274478
   Identification of clustered microRNAs using an ab initio prediction method
   Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M
   BMC Bioinformatics (2005) 6:267