miRBase entry: hsa-mir-552

Stem-loop hsa-mir-552


Accession
MI0003557
Symbol
HGNC: MIR552
Description
Homo sapiens hsa-mir-552 precursor miRNA
Gene family
MIPF0000501; mir-552

Literature search
7 open access papers mention hsa-mir-552
(10 sentences)

Sequence

88 reads, 7 reads per million, 18 experiments
aaccauucaaauauaccacaguuuGUUUAACCUUUUGCCUGUUGGuugaagaugccuuucAACAGGUGACUGGUUAGACAAacugugguauauaca
..........((((((((((((((((((((((..((((((((((...((((....))))))))))))))..))))))))))))))))))))))...

Structure
aaccauucaa                      UU          Guu    a 
          auauaccacaguuuGUUUAACC  UUGCCUGUUG   gaag u
          ||||||||||||||||||||||  ||||||||||   ||||  
          uauauggugucaAACAGAUUGG  AGUGGACAAc   uuuc g
-------aca                      UC          ---    c 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr1: 34669599-34669694 [-]

Disease association
hsa-mir-552 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-552-3p

Accession MIMAT0003215
Description Homo sapiens hsa-miR-552-3p mature miRNA
Sequence 61 - AACAGGUGACUGGUUAGACAA - 81
Evidence experimental
SAGE [1], Illumina [2]

Mature hsa-miR-552-5p

Accession MIMAT0026615
Description Homo sapiens hsa-miR-552-5p mature miRNA
Sequence 25 - GUUUAACCUUUUGCCUGUUGG - 45
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 16505370
    The colorectal microRNAome
    "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
    "Proc Natl Acad Sci U S A (2006) 103:3687-3692

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45