miRBase entry: hsa-mir-558

Stem-loop hsa-mir-558


Accession
MI0003564
Symbol
HGNC: MIR558
Description
Homo sapiens hsa-mir-558 precursor miRNA
Gene family
MIPF0000538; mir-558

Literature search
15 open access papers mention hsa-mir-558
(23 sentences)

Sequence

299 reads, 708 reads per million, 78 experiments
gugugugugugugugugugguuauuuugguauaguagcucuagacucuauuauaguuuccUGAGCUGCUGUACCAAAAUaccacaaacgggcug
........((.(((.((((((.((((((((((((((((((..((..(((...)))..))..)))))))))))))))))))))))).))).))..

Structure
gugugugu  g   g      u                  ua  cu   u 
        gu ugu uguggu auuuugguauaguagcuc  ga  cua  
        || ||| |||||| ||||||||||||||||||  ||  ||| u
        cg gca acacca UAAAACCAUGUCGUCGAG  cu  gau  
------gu  g   a      -                  Uc  uu   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 32532153-32532246 [+]

Disease association
hsa-mir-558 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-558

Accession MIMAT0003222
Description Homo sapiens hsa-miR-558 mature miRNA
Sequence 61 - UGAGCUGCUGUACCAAAAU - 79
Evidence experimental
RT-PCR [1], SAGE [1]

References

  1. PubMed ID: 16505370
    The colorectal microRNAome
    "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
    "Proc Natl Acad Sci U S A (2006) 103:3687-3692