Stem-loop sequence hsa-mir-563

AccessionMI0003569 (change log)
Symbol HGNC:MIR563
DescriptionHomo sapiens miR-563 stem-loop
Gene family MIPF0000519; mir-563
Literature search

1 open access papers mention hsa-mir-563
(1 sentences)

Stem-loop 
   agcaaagaag  u      cucua              cu       
5'           ug guugcc     ggaaauguguguug  cugaug 
             || ||||||     ||||||||||||||  ||||| u
3'           ac cgaugg     ccuuugcauacagu  gauuaa 
   ----------  -      ---uc              ug
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Deep sequencing
8 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr3: 15873771-15873849 [+]
antisense
OTTHUMT00000339758 ; ANKRD28-003; intron 1
OTTHUMT00000339756 ; ANKRD28-001; intron 1
OTTHUMT00000339757 ; ANKRD28-002; intron 1
ENST00000399451 ; ANKRD28-003; intron 1
ENST00000412318 ; ANKRD28-001; intron 1
ENST00000439830 ; ANKRD28-002; intron 1
Database links

Mature sequence hsa-miR-563

Accession MIMAT0003227
Sequence

52 -  

agguugacauacguuuccc

 - 70

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Evidence experimental; Microarray [1], SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).