Stem-loop sequence hsa-mir-566

Accession MI0003572
Symbol HGNC:MIR566
Description Homo sapiens miR-566 stem-loop
Gene family MIPF0000576; mir-566
Stem-loop 
----------------gcuagg  u   gg      --c    ga     a  a u 
                      cg ggu  cgggcg   cugu  uccca cu c c
                      || |||  ||||||   ||||  ||||| || |  
                      gc cca  guucgc   gacg  ggggu gg g a
cgagugacguuggaagcggagg  -   -a      uaa    ac     c  a g
Get sequence
Deep sequencing
109 reads, 31 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr3: 50210759-50210852 [+]
sense
OTTHUMT00000345963 ; SEMA3F-005; intron 2
OTTHUMT00000345961 ; SEMA3F-003; intron 2
OTTHUMT00000345962 ; SEMA3F-004; intron 2
OTTHUMT00000345929 ; SEMA3F-001; intron 2
OTTHUMT00000345964 ; SEMA3F-006; intron 2
OTTHUMT00000345930 ; SEMA3F-002; intron 2
OTTHUMT00000345963 ; SEMA3F-005; intron 2
OTTHUMT00000345961 ; SEMA3F-003; intron 2
OTTHUMT00000345962 ; SEMA3F-004; intron 2
OTTHUMT00000345929 ; SEMA3F-001; intron 2
OTTHUMT00000345964 ; SEMA3F-006; intron 2
OTTHUMT00000345930 ; SEMA3F-002; intron 2
OTTHUMT00000345963 ; SEMA3F-005; intron 2
OTTHUMT00000345961 ; SEMA3F-003; intron 2
OTTHUMT00000345962 ; SEMA3F-004; intron 2
OTTHUMT00000345929 ; SEMA3F-001; intron 2
OTTHUMT00000345964 ; SEMA3F-006; intron 2
OTTHUMT00000345930 ; SEMA3F-002; intron 2
ENST00000414301 ; SEMA3F-005; intron 2
ENST00000450338 ; SEMA3F-003; intron 2
ENST00000413852 ; SEMA3F-004; intron 2
ENST00000002829 ; SEMA3F-001; intron 2
ENST00000426511 ; SEMA3F-006; intron 2
ENST00000434342 ; SEMA3F-002; intron 2
ENST00000414301 ; SEMA3F-005; intron 2
ENST00000450338 ; SEMA3F-003; intron 2
ENST00000413852 ; SEMA3F-004; intron 2
ENST00000002829 ; SEMA3F-001; intron 2
ENST00000426511 ; SEMA3F-006; intron 2
ENST00000434342 ; SEMA3F-002; intron 2
ENST00000414301 ; SEMA3F-005; intron 2
ENST00000450338 ; SEMA3F-003; intron 2
ENST00000413852 ; SEMA3F-004; intron 2
ENST00000002829 ; SEMA3F-001; intron 2
ENST00000426511 ; SEMA3F-006; intron 2
ENST00000434342 ; SEMA3F-002; intron 2
Database links

Mature sequence hsa-miR-566

Accession MIMAT0003230
Sequence

16 -  

gggcgccugugaucccaac

 - 34

Get sequence
Deep sequencing 12 reads, 7 experiments
Evidence experimental; SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).