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miRBase |
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Stem-loop sequence hsa-mir-550a-1 |
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Accession | MI0003600 (change log) | |||||
Previous IDs | hsa-mir-550-1 | |||||
Symbol | HGNC:MIR550A1 | |||||
Description | Homo sapiens miR-550a-1 stem-loop | |||||
Gene family | MIPF0000334; mir-550 | |||||
Literature search |
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18 open access papers mention hsa-mir-550a-1 | |||||
Stem-loop |
u u u c cu gca g c gu 5' ga gcuu g ugg ggu gugccugagggaguaaga c cuguu u || |||| | ||| ||| |||||||||||||||||| | ||||| g 3' cu ugaa c acc cua cacggacucccucauucu g gauag u u c - a -u --- - u aa |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence hsa-miR-550a-5p |
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Accession | MIMAT0004800 |
Previous IDs | hsa-miR-550;hsa-miR-550a |
Sequence |
22 - agugccugagggaguaagagccc - 44 |
Deep sequencing | 8584 reads, 140 experiments |
Evidence | experimental; cloned [2] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-550a-3p |
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Accession | MIMAT0003257 |
Previous IDs | hsa-miR-550;hsa-miR-550*;hsa-miR-550a* |
Sequence |
61 - ugucuuacucccucaggcacau - 82 |
Deep sequencing | 13506 reads, 136 experiments |
Evidence | experimental; RAKE [1], Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:16505370
"The colorectal microRNAome"
Proc Natl Acad Sci U S A. 103:3687-3692(2006).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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