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miRBase |
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Stem-loop sequence hsa-mir-642a |
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Accession | MI0003657 (change log) | |||||
Previous IDs | hsa-mir-642 | |||||
Symbol | HGNC:MIR642A | |||||
Description | Homo sapiens miR-642a stem-loop | |||||
Gene family | MIPF0000468; mir-642 | |||||
Literature search |
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9 open access papers mention hsa-mir-642a | |||||
Stem-loop |
------------au g ggu 5' cugaguugggagg ucccucuccaaaugugucuugg g ||||||||||||| |||||||||||||||||||||| g 3' ggcucaacccucc agggagagguuuacacagaacu g uuacuaccgucucc a agg |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence hsa-miR-642a-5p |
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Accession | MIMAT0003312 |
Previous IDs | hsa-miR-642;hsa-miR-642a |
Sequence |
16 - gucccucuccaaaugugucuug - 37 |
Deep sequencing | 678 reads, 101 experiments |
Evidence | experimental; RT-PCR [1], SAGE [1], cloned [2] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-642a-3p |
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Accession | MIMAT0020924 |
Sequence |
51 - agacacauuuggagagggaacc - 72 |
Deep sequencing | 939 reads, 108 experiments |
Evidence | experimental; SOLiD [3] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:16505370
"The colorectal microRNAome"
Proc Natl Acad Sci U S A. 103:3687-3692(2006).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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3 |