Stem-loop sequence hsa-mir-648

AccessionMI0003663 (change log)
Symbol HGNC:MIR648
DescriptionHomo sapiens miR-648 stem-loop
Gene family MIPF0000476; mir-648
Literature search

9 open access papers mention hsa-mir-648
(21 sentences)

Stem-loop 
   au   aga   c   ----      g    ----     gg  -g     gg 
5'   cac   cac ucc    aagugu cagg    gcacu  ug  gggcc  g
     |||   ||| |||    |||||| ||||    |||||  ||  |||||   
3'   gug   gug agg    uucacg gucc    cguga  gc  cccgg  g
   --   gga   a   cuga      -    agga     aa  ga     ac
Get sequence
Deep sequencing
25 reads, 31.2 reads per million, 16 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr22: 17980868-17980961 [-]
antisense
OTTHUMT00000316226 ; CECR2-002; intron 5
OTTHUMT00000316104 ; CECR2-001; intron 5
ENST00000262608 ; CECR2-201; intron 4
ENST00000400585 ; CECR2-002; intron 5
ENST00000400573 ; CECR2-001; intron 5
ENST00000342247 ; CECR2-202; intron 5
Database links

Mature sequence hsa-miR-648

Accession MIMAT0003318
Sequence

16 -  

aagugugcagggcacuggu

 - 34

Get sequence
Deep sequencing3 reads, 3 experiments
Evidence experimental; SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).