Stem-loop hsa-mir-548d-2

Accession

MI0003671

Symbol

HGNC: MIR548D2

Description

Homo sapiens hsa-mir-548d-2 precursor miRNA

Literature search

58 open access papers mention hsa-mir-548d-2
(278 sentences)

Sequence

1858 reads, 21 reads per million, 83 experiments

gagagggaagauuuagguuggugcAAAAGUAAUUGUGGUUUUUGCCauugaaaguaauggCAAAAACCACAGUUUCUUUUGCaccaaccuaauaaaa
............(((((((((((((((((.((((((((((((((((((((....)))))))))))))))))))).))))))))))))))))).....

Structure

gagagggaagau                 U                    a 
            uuagguuggugcAAAAG AAUUGUGGUUUUUGCCauug a
            ||||||||||||||||| ||||||||||||||||||||  
            aauccaaccaCGUUUUC UUGACACCAAAAACgguaau a
-------aaaau                 U                    g 

Annotation confidence Medium

Genome context

chr17: 67471489-67471585 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-548d-2

Disease association

hsa-mir-548d-2 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548d-5p

• Accession: MIMAT0004812
• Description: Homo sapiens hsa-miR-548d-5p mature miRNA
• Sequence: 25 - AAAAGUAAUUGUGGUUUUUGCC - 46
• Evidence: experimental ; cloned [2]

Mature hsa-miR-548d-3p

• Accession: MIMAT0003323
• Description: Homo sapiens hsa-miR-548d-3p mature miRNA
• Sequence: 61 - CAAAAACCACAGUUUCUUUUGC - 82
• Evidence: experimental ; RT-PCR [1], SAGE [1], cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692