Stem-loop sequence hsa-mir-767

Accession

MI0003763 (change log)

Symbol

HGNC:MIR767

Description

Homo sapiens miR-767 stem-loop

Gene family

MIPF0000552; mir-767

Literature search

15 open access papers mention hsa-mir-767
(21 sentences)

Stem-loop

     -uuuu   u  u             u c       uu  c      u    c 
5' gc     aua ug agguuuuugcuca g accaugg  gu ugagca gcag a
   ||     ||| || ||||||||||||| | |||||||  || |||||| |||| u
3' cg     ugu ac uccaaggacgagu u ugguacc  ca acucgu uguu g
     ucauc   u  u             c u       -c  u      c    c 

Deep sequencing

2233 reads, 30 reads per million, 50 experiments

Confidence

Annotation confidence: high

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chrX: 152393421-152393529 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000144474 ; AC151961.1-001; exon 1

  ENST00000456193 ; AC151961.1-001; exon 1

Clustered miRNAs

< 10kb from hsa-mir-767

• hsa-mir-105-2: chrX: 152394412-152394492 [-]
• hsa-mir-767: chrX: 152393421-152393529 [-]
• hsa-mir-105-1: chrX: 152392219-152392299 [-]

Database links

• EntrezGene:MIR767
• HGNC:MIR767
• RNAcentral:URS000075ED21_9606
• miRBase Tracker:MI0003763

Mature sequence hsa-miR-767-5p

• Accession: MIMAT0003882
• Sequence: 27 - ugcaccaugguugucugagcaug - 49
• Deep sequencing: 2121 reads, 48 experiments
• Evidence: experimental; cloned [1]
• Database links:
  • RNAcentral:URS000045147B_9606
• Predicted targets:
  • TargetMiner:hsa-miR-767-5p
  • TargetScanVert:hsa-miR-767-5p
  • miRDB:hsa-miR-767-5p
  • microrna.org:hsa-miR-767-5p

Mature sequence hsa-miR-767-3p

• Accession: MIMAT0003883
• Sequence: 61 - ucugcucauaccccaugguuucu - 83
• Deep sequencing: 96 reads, 29 experiments
• Evidence: experimental; cloned [1]
• Database links:
  • RNAcentral:URS000050F899_9606
• Predicted targets:
  • TargetMiner:hsa-miR-767-3p
  • TargetScanVert:hsa-miR-767-3p
  • miRDB:hsa-miR-767-3p
  • microrna.org:hsa-miR-767-3p

References

1. PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).