Stem-loop mmu-mir-1264

Accession

MI0004130

Symbol

MGI: Mir1264

Description

Mus musculus mmu-mir-1264 precursor miRNA mir-1264

Gene
family

RF03528; mir-1264

Literature search

3 open access papers mention mmu-mir-1264
(3 sentences)

Sequence

310 reads, 6 reads per million, 19 experiments

ccuggcauauagcAGGUCCUCAAUAAGUAUUUGUUgaaaaaauaaaugaagcaaCAAAUCUUAUUUGAGCACCUGUuauguggagg
(((..((((((((((((.(((((((((.((((((((...............)))))))))))).))))).)))))))))))).)))

Structure

   gg            C     -    U        aaaaaa 
ccu  cauauagcAGGU CUCAA UAAG AUUUGUUg      u
|||  |||||||||||| ||||| |||| ||||||||      a
gga  guguauUGUCCA GAGUU AUUC UAAACaac      a
   -g            C     U    -        gaagua 

Annotation confidence High

Comments

This sequence was identified as a miRNA candidate by Berezikov et al [1], and confirmed later by sequencing [2].

Genome context

chrX: 147010601-147010686 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mmu-mir-1264

Mature mmu-miR-1264-5p

• Accession: MIMAT0014802
• Description: Mus musculus mmu-miR-1264-5p mature miRNA
• Sequence: 14 - AGGUCCUCAAUAAGUAUUUGUU - 35
• Evidence: experimental ; Illumina [2]

Mature mmu-miR-1264-3p

• Accession: MIMAT0014803
• Description: Mus musculus mmu-miR-1264-3p mature miRNA
• Sequence: 55 - CAAAUCUUAUUUGAGCACCUGU - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 16954537
   Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
   "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
   "Genome Res (2006) 16:1289-1298