Stem-loop mmu-mir-670

Accession

MI0004295

Symbol

MGI: Mir670

Description

Mus musculus mmu-mir-670 precursor miRNA mir-670

Gene
family

RF03414; mir-670

Literature search

2 open access papers mention mmu-mir-670
(2 sentences)

Sequence

567 reads, 15 reads per million, 45 experiments

gguuuggaggugggccugacAUCCCUGAGUGUAUGUGGUGAAccugaacuugcccugggUUUCCUCAUAUCCAUUCAGGAGUGUcagcugccucuucgcu
(((..((((((((..(((((((.((((((((.((((((.(((((((.........))))))).).))))).)))))))).)))))))))))))))..)))

Structure

   uu        gc       C        U     - U       aac 
ggu  ggaggugg  cugacAU CCUGAGUG AUGUG G GAAccug   u
|||  ||||||||  ||||||| |||||||| ||||| | |||||||   u
ucg  ucuccguc  gacUGUG GGACUUAC UAUAC C UUUgggu   g
   cu        --       A        C     U C       ccc 

Annotation confidence Medium

Genome context

chr2: 94261300-94261399 [-]

Mature mmu-miR-670-5p

• Accession: MIMAT0003736
• Description: Mus musculus mmu-miR-670-5p mature miRNA
• Sequence: 21 - AUCCCUGAGUGUAUGUGGUGAA - 42
• Evidence: experimental ; MPSS [1], RAKE [2], Illumina [3,5]

Mature mmu-miR-670-3p

• Accession: MIMAT0017242
• Description: Mus musculus mmu-miR-670-3p mature miRNA
• Sequence: 60 - UUUCCUCAUAUCCAUUCAGGAGUGU - 84
• Evidence: experimental ; 454 [4], Illumina [5]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 20668074
   Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
   "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
   "J Virol (2010) 84:10266-10275


4. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771


5. PubMed ID: 16954537
   Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
   "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
   "Genome Res (2006) 16:1289-1298