Stem-loop mmu-mir-495

Accession

MI0004639

Symbol

MGI: Mir495

Description

Mus musculus mmu-mir-495 precursor miRNA mir-329

Gene
family

RF04295; mir-329

Literature search

24 open access papers mention mmu-mir-495
(88 sentences)

Sequence

23311 reads, 551 reads per million, 81 experiments

aaaGAAGUUGCCCAUGUUAUUUUUCGcuuuuauuugugacgAAACAAACAUGGUGCACUUCUU
.(((((((.(((((((((.(((.((((........)))).)))...))))))).)))))))))

Structure

a       U  -       --A   U    uuu 
 aaGAAGU GC CCAUGUU   UUU UCGc   u
 ||||||| || |||||||   ||| ||||    
 UUCUUCA CG GGUACAA   AAg agug   a
-       -  U       ACA   c    uuu 

Annotation confidence High

Genome context

chr12: 109718754-109718816 [+]

Clustered miRNAs

23 other miRNAs are < 10 kb from mmu-mir-495

Mature mmu-miR-495-5p

• Accession: MIMAT0017249
• Description: Mus musculus mmu-miR-495-5p mature miRNA
• Sequence: 4 - GAAGUUGCCCAUGUUAUUUUUCG - 26
• Evidence: experimental ; Illumina [4]

Mature mmu-miR-495-3p

• Accession: MIMAT0003456
• Description: Mus musculus mmu-miR-495-3p mature miRNA
• Sequence: 42 - AAACAAACAUGGUGCACUUCUU - 63
• Evidence: experimental ; MPSS [1], cloned [2], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771