miRBase entry: mmu-mir-700

Stem-loop mmu-mir-700


Accession
MI0004684
Symbol
MGI: Mir700
Description
Mus musculus mmu-mir-700 precursor miRNA

Literature search
7 open access papers mention mmu-mir-700
(15 sentences)

Sequence

7602 reads, 79 reads per million, 100 experiments
uucacugggagUAAGGCUCCUUCCUGUGCUUGCaggggagaaauacgaacugCACGCGGGAACCGAGUCCACCcccagu
...((((((.((..(((((.((((((((..(((((..............)))))))))))))..))))).)).))))))

Structure
uuc      a  AA     -C        CU     gggaga 
   acuggg gU  GGCUC  UUCCUGUG  UGCag      a
   |||||| ||  |||||  ||||||||  |||||       
   ugaccc CA  CUGAG  AAGGGCGC  ACguc      a
---      C  -C     CC        --     aagcau 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr4: 135416555-135416633 [-]

Database links

Mature mmu-miR-700-5p

Accession MIMAT0017256
Description Mus musculus mmu-miR-700-5p mature miRNA
Sequence 12 - UAAGGCUCCUUCCUGUGCUUGC - 33
Evidence experimental
454 [3], Illumina [4]
Database links
Predicted targets

Mature mmu-miR-700-3p

Accession MIMAT0003490
Description Mus musculus mmu-miR-700-3p mature miRNA
Sequence 53 - CACGCGGGAACCGAGUCCACC - 73
Evidence experimental
MPSS [1], Illumina [2,4]
Database links
Predicted targets

References

  1. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  2. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  3. PubMed ID: 20668074
    Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
    "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
    "J Virol (2010) 84:10266-10275

  4. PubMed ID: 16582102
    The expression profile of microRNAs in mouse embryos
    "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
    "Nucleic Acids Res (2006) 34:1765-1771