Stem-loop sequence mmu-mir-709

Accession

MI0004693 (change log)

Symbol

MGI:Mir709

Description

Mus musculus miR-709 stem-loop

Literature search

36 open access papers mention mmu-mir-709
(263 sentences)

Stem-loop

   u    - g u          ua     aag     u     ua  a 
5'  gucc c u ucucugcuuc  cucag   ugcuc gagca  ga c
    |||| | | ||||||||||  |||||   ||||| |||||  ||  
3'  uagg g a ggagacggag  ggguc   acgag uuugu  cu u
   -    a g c          --     acg     -     -c  g 

Deep sequencing

2349 reads, 189 reads per million, 111 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr8: 84086099-84086186 [+]
• Overlapping transcripts:

  sense

  ENSMUST00000005600 ; Rfx1-201; intron 8

Database links

• EntrezGene:Mir709
• MGI:Mir709
• RNAcentral:URS000075E062_10090
• miRBase Tracker:MI0004693

Mature sequence mmu-miR-709

• Accession: MIMAT0003499
• Sequence: 69 - ggaggcagaggcaggagga - 87
• Deep sequencing: 2263 reads, 108 experiments
• Evidence: experimental; MPSS [1]
• Database links:
  • RNAcentral:URS0000533C81_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-709
  • miRDB:mmu-miR-709
  • microrna.org:mmu-miR-709

References

1. PMID:16582102 "The expression profile of microRNAs in mouse embryos" Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I Nucleic Acids Res. 34:1765-1771(2006).