Stem-loop ppt-MIR1212

Accession

MI0004711

Description

Physcomitrella patens ppt-MIR1212 precursor miRNA

Literature search

1 open access papers mention ppt-MIR1212
(1 sentences)

Sequence

guaugaggaguugcauccucugcugugcccacaugcgucguggcgcguggcggccgcgCGUGGGACAGCAUAGAAUGCGgauccuugua
.((((((((.((((((.((.((((((.(((((.((((..((.((.....)).)))))).))))))))))).)).)))))).))))))))

Structure

g        g      c  c      g     a    uc  g  g 
 uaugagga uugcau cu ugcugu cccac ugcg  gu gc c
 |||||||| |||||| || |||||| ||||| ||||  || || g
 auguuccu gGCGUA GA ACGACA GGGUG gcgc  cg cg u
-        a      A  U      -     C    --  g  g 

Annotation confidence Not enough data

Genome context

Chr13: 2520122-2520210 [+]

Mature ppt-miR1212

• Accession: MIMAT0003901
• Description: Physcomitrella patens ppt-miR1212 mature miRNA
• Sequence: 59 - CGUGGGACAGCAUAGAAUGCG - 79
• Evidence: experimental ; Northern [1], cloned [2], 454 [3]

References

1. PubMed ID: 17359535
   Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution
   Fattash I, Voss B, Reski R, Hess WR, Frank W
   BMC Plant Biol (2007) 7:13


2. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769


3. PubMed ID: 16824179
   Novel micro-RNAs and intermediates of micro-RNA biogenesis from moss
   "Talmor-Neiman M, Stav R, Frank W, Voss B, Arazi T"
   "Plant J (2006) 47:25-37