miRBase entry: dre-mir-499

Stem-loop dre-mir-499


Accession
MI0004766
Description
Danio rerio dre-mir-499 precursor miRNA
Gene family
MIPF0000173; mir-499

Literature search
15 open access papers mention dre-mir-499
(154 sentences)

Sequence

3781 reads, 230 reads per million, 7 experiments
acugagagggaggcagUUAAGACUUGCAGUGAUGUUUAgagaaaugucacaugAACAUCACUUUAAGUCUGUGCUggcuccuguucugagu
(((.((((((((.((((..(((((((.(((((((((((..((....))...))))))))))).)))))))..)))).)))))..))).)))

Structure
   g   --     g    UA       C           -ga  a 
acu aga  gggag cagU  AGACUUG AGUGAUGUUUA   ga a
||| |||  ||||| ||||  ||||||| |||||||||||   ||  
uga ucu  uccuc gUCG  UCUGAAU UCACUACAAgu   cu u
   g   ug     g    UG       U           aca  g 


Annotation confidence High
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Genome context
chr11: 25205153-25205243 [-]

Database links

Mature dre-miR-499-5p

Accession MIMAT0003749
Description Danio rerio dre-miR-499-5p mature miRNA
Sequence 17 - UUAAGACUUGCAGUGAUGUUUA - 38
Evidence experimental
cloned [1], in-situ [1], Northern [1]
Database links
Predicted targets

Mature dre-miR-499-3p

Accession MIMAT0032009
Description Danio rerio dre-miR-499-3p mature miRNA
Sequence 54 - AACAUCACUUUAAGUCUGUGCU - 75
Evidence not_experimental
Database links

References

  1. PubMed ID: 16698962
    Cloning and expression of new microRNAs from zebrafish
    "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
    "Nucleic Acids Res (2006) 34:2558-2569