Stem-loop dre-mir-729

Accession

MI0004773

Description

Danio rerio dre-mir-729 precursor miRNA

Gene family

MIPF0001307; mir-729

Sequence

52 reads, 10 reads per million, 8 experiments

cgucaagggccauccagugacccgggguuguauuguaaccaagcuguaaguguccaugaugCAUGGGUAUGAUACGACCUGGGUUacagaauggugaug
((((....(((((.(.((((((((((.((((((((((.(((.((................)).))).)))))))))))))))))))).).)))))))))

Structure

    aagg     c a          g          a   a  uguaagu 
cguc    gccau c gugacccggg uuguauugua cca gc       g
||||    ||||| | |||||||||| |||||||||| ||| ||        
guag    uggua g caUUGGGUCC AGCAUAGUAU GGU Cg       u
    ----     a a          -          G   A  uaguacc 

Annotation confidence Not enough data

Genome context

chr4: 13584483-13584581 [+]

Mature dre-miR-729

• Accession: MIMAT0003758
• Description: Danio rerio dre-miR-729 mature miRNA
• Sequence: 62 - CAUGGGUAUGAUACGACCUGGGUU - 85
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569