miRBase entry: dre-mir-730

Stem-loop dre-mir-730


Accession
MI0004775
Description
Danio rerio dre-mir-730 precursor miRNA
Gene family
MIPF0000134; mir-460


Sequence

229 reads, 19 reads per million, 10 experiments
ggguucuccggucUCCUCAUUGUGCAUGCUGUGUGUcuucagucugguccucacagcgccugcaauguggaggcuaggggacuc
((((((((.(((((((.((((((...(((((((.(.((.......)).)..)))))))...)))))).))))))).))))))))

Structure
        c       U      GCA       -U U  uc 
ggguucuc ggucUCC CAUUGU   UGCUGUG  G cu  a
|||||||| ||||||| ||||||   |||||||  | ||  g
cucagggg ucggagg guaacg   gcgacac  c gg  u
        a       u      ucc       uc u  uc 


Annotation confidence High
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Genome context
chr7: 23362162-23362245 [+]

Database links

Mature dre-miR-730

Accession MIMAT0003760
Description Danio rerio dre-miR-730 mature miRNA
Sequence 14 - UCCUCAUUGUGCAUGCUGUGUGU - 36
Evidence experimental
cloned [1], Northern [1]
Database links
Predicted targets

References

  1. PubMed ID: 16698962
    Cloning and expression of new microRNAs from zebrafish
    "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
    "Nucleic Acids Res (2006) 34:2558-2569