miRBase entry: dre-mir-733

Stem-loop dre-mir-733


Accession
MI0004778
Description
Danio rerio dre-mir-733 precursor miRNA

Literature search
1 open access papers mention dre-mir-733
(1 sentences)

Sequence

427 reads, 106 reads per million, 11 experiments
uggcuuuuccguagugucgcuguUGCGUUGGUUUAGCUCAGUGGUUacuucugugaucccugaaaaaucaaccuuucauggucaccucggugcca
((((....(((..(((.(..((....((((((((...((((.((((((....)))))).)))).))))))))....))..).)))..))).))))

Structure
    uuuu   ua   u gc  uUGC        AGC    U      u 
uggc    ccg  gug c  ug    GUUGGUUU   UCAG GGUUac u
||||    |||  ||| |  ||    ||||||||   |||| ||||||  
accg    ggc  cac g  ac    caacuaaa   aguc cuagug c
    ---u   uc   u gu  uuuc        --a    c      u 


Annotation confidence Not enough data
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Genome context
chr14: 2406978-2407072 [-]

Database links

Mature dre-miR-733

Accession MIMAT0003763
Description Danio rerio dre-miR-733 mature miRNA
Sequence 24 - UGCGUUGGUUUAGCUCAGUGGUU - 46
Evidence experimental
cloned [1], in-situ [1], Northern [1]
Database links
Predicted targets

References

  1. PubMed ID: 16698962
    Cloning and expression of new microRNAs from zebrafish
    "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
    "Nucleic Acids Res (2006) 34:2558-2569