Stem-loop sequence xtr-mir-10b

AccessionMI0004797 (change log)
DescriptionXenopus tropicalis miR-10b stem-loop
Gene family MIPF0000033; mir-10
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-10_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

The miR-10 microRNA precursor is a short non-coding RNA gene involved in gene regulation. It is part of an RNA gene family which contains miR-10, miR-51, miR-57, miR-99 and miR-100. miR-10, miR-99 and miR-100 have now been predicted or experimentally confirmed in a wide range of species. (MIPF0000033, MIPF0000025) mir-51 and mir-57 have currently only been identified in the nematode Caenorhabditis elegans (MIPF0000268, MIPF0000271). microRNAs are transcribed as ~70 nucleotide precursors and subsequently processed by the Dicer enzyme to give a ~22 nucleotide product. In this case the mature sequence comes from the 5' arm of the precursor. The mature products are thought to have regulatory roles through complementarity to mRNA.

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   aa     u        a    g     c          -ug  u 
5'   cguug cuauaugu cccu uagaa cgaauuugug   gu c
     ||||| |||||||| |||| ||||| ||||||||||   ||  
3'   guagc gguauaua gggg aucuu gcuuagacac   ca g
   ac     u        -    g     a          uga  u 
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Genome context
Coordinates (Xenopus_tropicalis_v9.1; GCA_000004195.3) Overlapping transcripts
chr9: 59969699-59969786 [+]
Database links

Mature sequence xtr-miR-10b

Accession MIMAT0003558

16 - 


 - 37

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Evidence by similarity; MI0000267
Predicted targets