Stem-loop xtr-mir-27b

Accession

MI0004810

Description

Xenopus tropicalis xtr-mir-27b precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

accuuucuaccaaggugcagagcuuagcugauuggugaacagugauugauucccucuuugUUCACAGUGGCUAAGUUCUGCaccugaagagagggc
.(((((((....(((((((((((((((((.((((.(((((((.((.........)).))))))))))))))))))))))))))))..)))))))..

Structure

-a       acca                 g    g       u  uug 
  ccuuucu    aggugcagagcuuagcu auug ugaacag ga   a
  |||||||    ||||||||||||||||| |||| ||||||| ||   u
  ggagaga    uccaCGUCUUGAAUCGG UGAC ACUUguu cu   u
cg       --ag                 -    -       u  ccc 

Annotation confidence Not enough data

Genome context

chr1: 123463698-123463793 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from xtr-mir-27b

Mature xtr-miR-27b

• Accession: MIMAT0003571
• Description: Xenopus tropicalis xtr-miR-27b mature miRNA
• Sequence: 61 - UUCACAGUGGCUAAGUUCUGC - 81
• Evidence: not_experimental

References