miRBase entry: xtr-mir-30a

Stem-loop xtr-mir-30a

Accession
MI0004813
Description
Xenopus tropicalis xtr-mir-30a precursor miRNA
Gene family
MIPF0000005; mir-30
Sequence

gcgacUGUAAACAUCCUCGACUGGAAGcugugaagcaguugaagggCUUUCAGUCAGAUGUUUGCAGCugc
(((.(((((((((((...(((((((((((.(...........).))))))))))).))))))))))).)))
Structure
   a           CUC           g gaag 
gcg cUGUAAACAUC   GACUGGAAGcu u    c
||| |||||||||||   ||||||||||| |    a
cgu GACGUUUGUAG   CUGACUUUCgg a    g
   C           --A           g aguu
Annotation confidence Not enough data
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Genome context
chr5: 91687780-91687850 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-30a
Name Accession Chromosome Start End Strand Confidence



Database links

Mature xtr-miR-30a-5p

Accession MIMAT0003574
Description Xenopus tropicalis xtr-miR-30a-5p mature miRNA
Sequence 6 - UGUAAACAUCCUCGACUGGAAG - 27
Evidence not_experimental

Mature xtr-miR-30a-3p

Accession MIMAT0003575
Description Xenopus tropicalis xtr-miR-30a-3p mature miRNA
Sequence 47 - CUUUCAGUCAGAUGUUUGCAGC - 68
Evidence not_experimental

References
Comments or questions? Email mirbase@manchester.ac.uk