miRBase entry: xtr-mir-128-2

Stem-loop xtr-mir-128-2


Accession
MI0004828
Description
Xenopus tropicalis xtr-mir-128-2 precursor miRNA
Gene family
MIPF0000048; mir-128


Sequence

gugcagcuggaacgggggccguuacacuguaagagagugaguaguaggucUCACAGUGAACCGGUCUCUUUUcuuacugu
..((((..((((.((((((((...((((((..((((.(........).))))))))))...)))))))).))))..))))

Structure
gu    cu    c        uua      aa    g gag 
  gcag  ggaa gggggccg   cacugu  gaga u   u
  ||||  |||| ||||||||   ||||||  |||| |    
  uguc  ucUU UCUCUGGC   GUGACA  CUcu g   a
--    au    U        CAA      --    g aug 


Annotation confidence Not enough data
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Genome context
chr6: 82768836-82768915 [+]

Database links

Mature xtr-miR-128

Accession MIMAT0003589
Description Xenopus tropicalis xtr-miR-128 mature miRNA
Sequence 51 - UCACAGUGAACCGGUCUCUUUU - 72
Evidence experimental
Northern [1]

References

  1. PubMed ID: 18032731
    Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
    "Tang GQ, Maxwell ES"
    "Genome Res (2008) 18:104-112