Stem-loop sequence xtr-mir-138

AccessionMI0004839
DescriptionXenopus tropicalis miR-138 stem-loop
Gene family MIPF0000075; mir-138
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled miR-138. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

miR-138 is a family of microRNA precursors found in animals, including humans. MicroRNAs are typically transcribed as ~70 nucleotide precursors and subsequently processed by the Dicer enzyme to give a ~22 nucleotide product. The excised region or, mature product, of the miR-138 precursor is the microRNA mir-138. miR-138 has been used as an example of the post-transcriptional regulation of miRNA, due to the finding that while the precursor is expressed ubiquitously, the mature product is found only in specific cell types.

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Stem-loop
   cg   c        ag             uca      gacca 
5'   gug ggagcagc  cugguguugugaa   ggccgu     c
     ||| ||||||||  |||||||||||||   ||||||     u
3'   cac cuucguug  gaccacaacacuu   ucggca     c
   --   u        -g             -ca      aaaga 
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Confidence
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Genome context
Coordinates (JGI4.2) Overlapping transcripts
GL172956.1: 485840-485924 [-]
intergenic

Mature sequence xtr-miR-138

Accession MIMAT0003599
Sequence

15 - 

agcugguguugugaauc

 - 31

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Evidence by similarity; MI0000912
Predicted targets